Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910691.1_cds_XP_016460697.1_54094
CDS Infomation

[gene=LOC107784138] [db_xref=GeneID:107784138] [protein=HBS1-like protein isoform X2] [protein_id=XP_016460697.1] [location=complement(join(56194..56325,56512..56646,56746..56985,57782..57950,58314..58801,58893..59003,59089..59417,61850..62021))] [gbkey=CDS]
Sequence

ATGAATGTGTGTGATGTTTGTGGAAATACAAAGCAAGAACGGGTTAAGGCTGGGGTGTGG
CGTTGTCCCATTTGCACATTTGATAATGAAGATACCATGAATGTATGTGATATTTGTGGG
GTCCTTCGTAACCCATTGATCAAAAGTTGTGGCGGCAGCAAAGCTAGTGCAGCTACTCTT
GACAAAGTCTTACAGTCAAATGTCCCATCAAGTAAAAAAGAATTAGCTACTGAAGTTAAA
CAAGAACTGGTTACCGAAGGGCCTGCTAGCTCTTCTGCATCAACAGCAAAAGTTAGACGT
GATAATATGAAGGATAGAGGTTCTTCTAAAGAAACTAGGGCAAATCATGGTGTCACGAGC
AACATGAGCAATATGCCTATGTCATCAAATCCTTGCAATGCGGAGACCAGAAGTGCAACT
TCACGATCACAGAGTAAATCTCAGAAAATTGTATGCCCTGACCAATTAGAAGACAGATTG
GACCAGTTAAATCTCGCGATTGTTGGCCATGTTGATTCTGGGAAGTCAACATTATCAGGA
AGATTATTACACCTTTTGGGGCAGATATCTCAGAAGGAAATGCACAAATATGAGAAAGAG
GCCAAGCAGCAAGGAAAGGGGTCCTTTGCTTATGCCTGGGCATTGGATGAGAGTGCTGAG
GAAAGAGAGAGGGGAATAACTATGACAGTGGCTGTTGCCTACTTTAACACGAAAAGTTAC
CGTGTTGTACTACTTGATTCCCCAGGCCATAGAGACTTTGTCCCAAATATGATATCAGGT
GCAACACAAGCAGATGCTGCAGTTCTCGTAATTGATGCTTCAATAGGTGCATTTGAAGCA
GGGATTGATGTTACTGGAGGTCAGACAAGGGAGCATGCACTACTTATCAAAAGCTTTGGG
GTGGATCAAATAATAATTGCTATTAATAAAATGGATGCAGTGGGATACTCCAAAGAACGT
TTTGATACAATTAAGAATCAACTAGGATCTTTTCTTCGTTCTTGCAAGTTTAAAGATTCG
TCAGTATTGTGGATTCCCCTGAGTGCCATGGAAAACCAAAATTTGGTGACAAGTCCGTCT
GACGCAAGATTGTTGTCCTGGTTTCAAGGTCCTTGCCTTTTGGATGCAATAGACTCTCTC
CAACCTCCCCAAAGAGATTACTCAAAGCCTCTATTAATGCCGATATGTGATCTTGTTAAA
TCACCGTCACAAGGACAGGTGTCAGTATGCGGGAAGTTGGAGACAGGAGCTCTTCAAGTT
GGAGAAAAGGTTCTAGTTATGCCATCAAGAGAAATGGCAACAGTGCGTTCTTTGGAACAT
GATTCTCAGGTTTGTAACAGTACAAAAGCTGGAGACAATGTCACTGTTAATCTACAAGGT
ATAGACGCGAATCGTGTAATGGCAGGGGATGTGCTGTGTCACCCTGAATATCCTATTGCT
GTTACAAATTGTTTGGAACTGAAGATTCTCATCCTGGATATTGCCGTTCCAATTTTGATT
GGCTCTCAGTTGGAGTTTCATGTACACCATGCTAAGGAGGCTGCAAGAGTTGTGAGGATT
TTGTCATTGCTTGATCCAAAGACTGGAAAGGAGACCAAGAAATCACCTCGATGTCTTCTA
GCAAAGCAGAATGCTATAGTCGAGGTGGTCTTGCAAGGAATGATTTGTGTTGAAGAGCAT
TCTAAATGTAAGTCTCTTGGAAGGGTGTCCCTCAGGGCATCAGGAAGAACTGTTGCTCTT
GGTCTTGTGACTCGAGTTCTAGAGAAGAACGAATAG

Peptide Sequence

PEP ID

XP_016460697.1
PEP Infomation

PREDICTED: HBS1-like protein isoform X2 [Nicotiana tabacum]
Sequence

MNVCDVCGNTKQERVKAGVWRCPICTFDNEDTMNVCDICGVLRNPLIKSCGGSKASAATL
DKVLQSNVPSSKKELATEVKQELVTEGPASSSASTAKVRRDNMKDRGSSKETRANHGVTS
NMSNMPMSSNPCNAETRSATSRSQSKSQKIVCPDQLEDRLDQLNLAIVGHVDSGKSTLSG
RLLHLLGQISQKEMHKYEKEAKQQGKGSFAYAWALDESAEERERGITMTVAVAYFNTKSY
RVVLLDSPGHRDFVPNMISGATQADAAVLVIDASIGAFEAGIDVTGGQTREHALLIKSFG
VDQIIIAINKMDAVGYSKERFDTIKNQLGSFLRSCKFKDSSVLWIPLSAMENQNLVTSPS
DARLLSWFQGPCLLDAIDSLQPPQRDYSKPLLMPICDLVKSPSQGQVSVCGKLETGALQV
GEKVLVMPSREMATVRSLEHDSQVCNSTKAGDNVTVNLQGIDANRVMAGDVLCHPEYPIA
VTNCLELKILILDIAVPILIGSQLEFHVHHAKEAARVVRILSLLDPKTGKETKKSPRCLL
AKQNAIVEVVLQGMICVEEHSKCKSLGRVSLRASGRTVALGLVTRVLEKNE

Transcript Sequence

Gene sequence data has not been registered.